PathogenApiServiceImpl.java

/*
 * Copyright 2026 Global Crop Diversity Trust
 * Licensed under the Apache License, Version 2.0
 * See LICENSE file in project root folder or http://www.apache.org/licenses/LICENSE-2.0
 */

package org.gringlobal.api.v2.facade.impl;

import java.util.List;

import org.gringlobal.api.model.PathogenDTO;
import org.gringlobal.api.model.TaxonomySpeciesDTO;
import org.gringlobal.api.v2.facade.PathogenApiService;
import org.gringlobal.model.community.Pathogen;
import org.gringlobal.service.PathogenAttachmentService;
import org.gringlobal.service.PathogenService;
import org.gringlobal.service.PathogenTaxonomySpeciesMapService;
import org.gringlobal.service.filter.PathogenFilter;

import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Service;
import org.springframework.transaction.annotation.Transactional;

@Service
public class PathogenApiServiceImpl extends APIFilteredServiceFacadeImpl<PathogenService, PathogenDTO, Pathogen, PathogenFilter> implements PathogenApiService {

	@Autowired
	private PathogenAttachmentService pathogenAttachmentService;

	@Autowired
	private PathogenTaxonomySpeciesMapService pathogenTaxonomySpeciesMapService;

@Override
protected Pathogen convert(PathogenDTO source) {
	return mapper.map(source);
}

@Override
protected PathogenDTO convert(Pathogen source) {
	return mapper.map(source);
}


@Override
	@Transactional(readOnly = true)
	public List<TaxonomySpeciesDTO> getPathogenSpecies(final Long pathogenId) {
		return mapper.map(pathogenTaxonomySpeciesMapService.getPathogenSpecies(service.get(pathogenId)), mapper::map);
	}

}